STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_001095Uncharacterized protein. (954 aa)    
Predicted Functional Partners:
THO1
THO complex subunit 1.
   
 0.972
THO3
THO complex subunit 3.
    
 0.972
THOC5
THO complex subunit 5.
   
 0.969
thoc7
THO complex subunit 7.
   
 0.961
cdc28
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28.
   
 0.957
CEF1
Pre-mRNA-splicing factor CEF1.
   
 
 0.935
Cbp80
Nuclear cap-binding protein subunit 1.
    
 0.900
NCBP2
Nuclear cap-binding protein subunit 2.
    
 0.897
mlo3_1
mRNA export protein mlo3.
   
 0.871
Hypma_007557
RRM domain-containing protein.
   
 0.871
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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