STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPCC70.08cPutative methyltransferase C70.08c. (319 aa)    
Predicted Functional Partners:
ubx1
UBX domain-containing protein 1.
    
   0.557
UBIQ
Ubiquitin.
    
 
 0.557
NPL4
Nuclear protein localization protein 4.
    
   0.554
Psmd6
26S proteasome non-ATPase regulatory subunit 6.
   
   0.546
Hypma_010088
Uncharacterized protein.
    
 
 0.459
rrn7
RNA polymerase I-specific transcription initiation factor rrn7.
    
 
 0.459
Hypma_000125
Uncharacterized protein.
    
 
 0.459
afg2
ATPase family gene 2 protein.
    
 
 0.424
CDC48
Cell division cycle protein 48; Belongs to the AAA ATPase family.
    
 
 0.424
yjoB
Putative ATPase YjoB.
    
 
 0.424
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.