Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEF1 | Srsf6 | A0A369JGB7 | A0A369JJR7 | Pre-mRNA-splicing factor CEF1. | Serine/arginine-rich splicing factor 6. | 0.783 |
CEF1 | dsk1_0 | A0A369JGB7 | A0A369J7E2 | Pre-mRNA-splicing factor CEF1. | Protein kinase dsk1. | 0.556 |
CEF1 | rsd1 | A0A369JGB7 | A0A369K7M9 | Pre-mRNA-splicing factor CEF1. | RNA-binding protein rsd1. | 0.948 |
CEF1 | srp1 | A0A369JGB7 | A0A369JU46 | Pre-mRNA-splicing factor CEF1. | Pre-mRNA-splicing factor srp1. | 0.783 |
CEF1 | srp2 | A0A369JGB7 | A0A369JLZ8 | Pre-mRNA-splicing factor CEF1. | Pre-mRNA-splicing factor srp2. | 0.936 |
Srsf6 | CEF1 | A0A369JJR7 | A0A369JGB7 | Serine/arginine-rich splicing factor 6. | Pre-mRNA-splicing factor CEF1. | 0.783 |
Srsf6 | dsk1_0 | A0A369JJR7 | A0A369J7E2 | Serine/arginine-rich splicing factor 6. | Protein kinase dsk1. | 0.504 |
Srsf6 | srp2 | A0A369JJR7 | A0A369JLZ8 | Serine/arginine-rich splicing factor 6. | Pre-mRNA-splicing factor srp2. | 0.597 |
dsk1_0 | CEF1 | A0A369J7E2 | A0A369JGB7 | Protein kinase dsk1. | Pre-mRNA-splicing factor CEF1. | 0.556 |
dsk1_0 | Srsf6 | A0A369J7E2 | A0A369JJR7 | Protein kinase dsk1. | Serine/arginine-rich splicing factor 6. | 0.504 |
dsk1_0 | rsd1 | A0A369J7E2 | A0A369K7M9 | Protein kinase dsk1. | RNA-binding protein rsd1. | 0.415 |
dsk1_0 | srp1 | A0A369J7E2 | A0A369JU46 | Protein kinase dsk1. | Pre-mRNA-splicing factor srp1. | 0.504 |
dsk1_0 | srp2 | A0A369J7E2 | A0A369JLZ8 | Protein kinase dsk1. | Pre-mRNA-splicing factor srp2. | 0.504 |
rsd1 | CEF1 | A0A369K7M9 | A0A369JGB7 | RNA-binding protein rsd1. | Pre-mRNA-splicing factor CEF1. | 0.948 |
rsd1 | dsk1_0 | A0A369K7M9 | A0A369J7E2 | RNA-binding protein rsd1. | Protein kinase dsk1. | 0.415 |
rsd1 | srp2 | A0A369K7M9 | A0A369JLZ8 | RNA-binding protein rsd1. | Pre-mRNA-splicing factor srp2. | 0.560 |
srp1 | CEF1 | A0A369JU46 | A0A369JGB7 | Pre-mRNA-splicing factor srp1. | Pre-mRNA-splicing factor CEF1. | 0.783 |
srp1 | dsk1_0 | A0A369JU46 | A0A369J7E2 | Pre-mRNA-splicing factor srp1. | Protein kinase dsk1. | 0.504 |
srp1 | srp2 | A0A369JU46 | A0A369JLZ8 | Pre-mRNA-splicing factor srp1. | Pre-mRNA-splicing factor srp2. | 0.843 |
srp2 | CEF1 | A0A369JLZ8 | A0A369JGB7 | Pre-mRNA-splicing factor srp2. | Pre-mRNA-splicing factor CEF1. | 0.936 |
page 1 of 2