HET-E1_15 protein (Hypsizygus marmoreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HET-E1_15

Vegetative incompatibility protein HET-E-1. (261 aa)

Predicted Functional Partners:

Rbbp5

0.826

ash2

0.826

Hypma_003781

0.826

Hypma_016567

0.821

SET1

0.797

Hypma_003282

0.779

gcn5

0.726

ssn6

0.720

Hypma_008318

0.687

H4.1_3

0.655

Your Current Organism:

Hypsizygus marmoreus

NCBI taxonomy Id: 39966
Other names: H. marmoreus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H4.1_3	HET-E1_15	A0A151VES4	A0A369J7F5	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Vegetative incompatibility protein HET-E-1.	0.655
H4.1_3	Rbbp5	A0A151VES4	A0A369JNV1	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Retinoblastoma-binding protein 5.	0.953
H4.1_3	SET1	A0A151VES4	A0A369JNZ4	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone-lysine N-methyltransferase, H3 lysine-4 specific.	0.951
H4.1_3	ash2	A0A151VES4	A0A369JXA5	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Set1 complex component ash2.	0.945
H4.1_3	gcn5	A0A151VES4	A0A369K067	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Histone acetyltransferase gcn5.	0.965
H4.1_3	ssn6	A0A151VES4	A0A369K671	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	General transcriptional corepressor ssn6.	0.566
HET-E1_15	H4.1_3	A0A369J7F5	A0A151VES4	Vegetative incompatibility protein HET-E-1.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.655
HET-E1_15	Hypma_003282	A0A369J7F5	A0A369K4M1	Vegetative incompatibility protein HET-E-1.	NACHT domain-containing protein.	0.779
HET-E1_15	Hypma_003781	A0A369J7F5	A0A369JYU8	Vegetative incompatibility protein HET-E-1.	NACHT domain-containing protein.	0.826
HET-E1_15	Hypma_008318	A0A369J7F5	A0A369JRR7	Vegetative incompatibility protein HET-E-1.	NACHT domain-containing protein.	0.687
HET-E1_15	Hypma_016567	A0A369J7F5	A0A369J008	Vegetative incompatibility protein HET-E-1.	NACHT domain-containing protein.	0.821
HET-E1_15	Rbbp5	A0A369J7F5	A0A369JNV1	Vegetative incompatibility protein HET-E-1.	Retinoblastoma-binding protein 5.	0.826
HET-E1_15	SET1	A0A369J7F5	A0A369JNZ4	Vegetative incompatibility protein HET-E-1.	Histone-lysine N-methyltransferase, H3 lysine-4 specific.	0.797
HET-E1_15	ash2	A0A369J7F5	A0A369JXA5	Vegetative incompatibility protein HET-E-1.	Set1 complex component ash2.	0.826
HET-E1_15	gcn5	A0A369J7F5	A0A369K067	Vegetative incompatibility protein HET-E-1.	Histone acetyltransferase gcn5.	0.726
HET-E1_15	ssn6	A0A369J7F5	A0A369K671	Vegetative incompatibility protein HET-E-1.	General transcriptional corepressor ssn6.	0.720
Hypma_003282	HET-E1_15	A0A369K4M1	A0A369J7F5	NACHT domain-containing protein.	Vegetative incompatibility protein HET-E-1.	0.779
Hypma_003781	HET-E1_15	A0A369JYU8	A0A369J7F5	NACHT domain-containing protein.	Vegetative incompatibility protein HET-E-1.	0.826
Hypma_008318	HET-E1_15	A0A369JRR7	A0A369J7F5	NACHT domain-containing protein.	Vegetative incompatibility protein HET-E-1.	0.687
Hypma_016567	HET-E1_15	A0A369J008	A0A369J7F5	NACHT domain-containing protein.	Vegetative incompatibility protein HET-E-1.	0.821