TIM9 protein (Hypsizygus marmoreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TIM9

Mitochondrial import inner membrane translocase subunit TIM9. (92 aa)

Predicted Functional Partners:

TIM10

0.999

TIM22

0.986

TIM54

0.948

MIA40

0.937

timm13-b

0.931

TIM8

0.913

sdh4

0.898

tim23

0.887

tom22

0.845

img2

0.833

Your Current Organism:

Hypsizygus marmoreus

NCBI taxonomy Id: 39966
Other names: H. marmoreus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MIA40	TIM10	A0A369JY01	A0A369K5V0	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM10.	0.907
MIA40	TIM22	A0A369JY01	A0A369JVR7	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM22.	0.523
MIA40	TIM8	A0A369JY01	A0A369K389	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM8; Belongs to the small Tim family.	0.816
MIA40	TIM9	A0A369JY01	A0A369J7N8	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM9.	0.937
MIA40	timm13-b	A0A369JY01	A0A369KGQ9	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit Tim13-B; Belongs to the small Tim family.	0.878
MIA40	tom22	A0A369JY01	A0A369J9M1	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import receptor subunit tom22.	0.534
TIM10	MIA40	A0A369K5V0	A0A369JY01	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial intermembrane space import and assembly protein 40.	0.907
TIM10	TIM22	A0A369K5V0	A0A369JVR7	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import inner membrane translocase subunit TIM22.	0.985
TIM10	TIM54	A0A369K5V0	A0A369JH65	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import inner membrane translocase subunit TIM54.	0.972
TIM10	TIM8	A0A369K5V0	A0A369K389	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import inner membrane translocase subunit TIM8; Belongs to the small Tim family.	0.990
TIM10	TIM9	A0A369K5V0	A0A369J7N8	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import inner membrane translocase subunit TIM9.	0.999
TIM10	img2	A0A369K5V0	A0A369JIZ4	Mitochondrial import inner membrane translocase subunit TIM10.	54S ribosomal protein img2, mitochondrial.	0.464
TIM10	sdh4	A0A369K5V0	A0A369J5L2	Mitochondrial import inner membrane translocase subunit TIM10.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.888
TIM10	tim23	A0A369K5V0	A0A369JNK9	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import inner membrane translocase subunit tim23.	0.882
TIM10	timm13-b	A0A369K5V0	A0A369KGQ9	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import inner membrane translocase subunit Tim13-B; Belongs to the small Tim family.	0.992
TIM10	tom22	A0A369K5V0	A0A369J9M1	Mitochondrial import inner membrane translocase subunit TIM10.	Mitochondrial import receptor subunit tom22.	0.797
TIM22	MIA40	A0A369JVR7	A0A369JY01	Mitochondrial import inner membrane translocase subunit TIM22.	Mitochondrial intermembrane space import and assembly protein 40.	0.523
TIM22	TIM10	A0A369JVR7	A0A369K5V0	Mitochondrial import inner membrane translocase subunit TIM22.	Mitochondrial import inner membrane translocase subunit TIM10.	0.985
TIM22	TIM54	A0A369JVR7	A0A369JH65	Mitochondrial import inner membrane translocase subunit TIM22.	Mitochondrial import inner membrane translocase subunit TIM54.	0.979
TIM22	TIM8	A0A369JVR7	A0A369K389	Mitochondrial import inner membrane translocase subunit TIM22.	Mitochondrial import inner membrane translocase subunit TIM8; Belongs to the small Tim family.	0.663