STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptc2Protein phosphatase 2C 2. (522 aa)    
Predicted Functional Partners:
SPAC9.02c
Putative N-acetyltransferase C9.02c.
    
   0.901
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.768
LRRC74A
Leucine-rich repeat-containing protein 74A.
   
 0.708
bkdB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
    
 0.695
MID1
Stretch-activated cation channel MID1.
   
 0.692
HOG1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.692
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 0.679
gsk3
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.660
Hypma_013252
Uncharacterized protein.
   
 0.637
SLT2_1
Mitogen-activated protein kinase.
   
 0.637
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.