STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_001175Putative elongation factor 1-gamma 1; Belongs to the GST superfamily. (244 aa)    
Predicted Functional Partners:
eef1b
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.993
TEF1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.940
rps2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.851
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.848
rpl401
60S ribosomal protein L4-B.
   
 
 0.843
Hypma_010133
Translationally-controlled tumor; Belongs to the TCTP family.
   
 
 0.839
RPL19B
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.836
rpp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.836
Rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.834
RPS4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 
 0.831
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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