STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mug56Meiotically up-regulated gene 56 protein. (1026 aa)    
Predicted Functional Partners:
Hypma_009574
Putative small nuclear ribonucleoprotein F.
    
  0.763
Hypma_009617
Uncharacterized protein.
    
 0.755
NCBP2
Nuclear cap-binding protein subunit 2.
   
  0.747
VPS13
Vacuolar protein sorting-associated protein 13.
    
 
 0.745
Hypma_009564
Uncharacterized protein.
    
  0.740
SMD3A
Small nuclear ribonucleoprotein Sm D3.
   
 0.740
smg1
Small nuclear ribonucleoprotein G.
    
  0.740
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 
 0.735
SYMPK
Symplekin.
    
 0.725
RNU1
U1 small nuclear ribonucleoprotein.
  
 0.716
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.