Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMD1_0 | MYL9 | A0A369K6W1 | A0A369K4A7 | Calmodulin; Belongs to the calmodulin family. | Myosin regulatory light polypeptide 9. | 0.795 |
CMD1_0 | ain1 | A0A369K6W1 | A0A369J7C1 | Calmodulin; Belongs to the calmodulin family. | Alpha-actinin-like protein 1. | 0.752 |
CMD1_0 | arsB_0 | A0A369K6W1 | A0A369JAA5 | Calmodulin; Belongs to the calmodulin family. | Arsenite resistance protein ArsB. | 0.547 |
CMD1_0 | cdc4 | A0A369K6W1 | A0A369K4J4 | Calmodulin; Belongs to the calmodulin family. | Myosin regulatory light chain cdc4. | 0.918 |
CMD1_1 | MYL9 | A0A369K1Y0 | A0A369K4A7 | Calmodulin. | Myosin regulatory light polypeptide 9. | 0.795 |
CMD1_1 | ain1 | A0A369K1Y0 | A0A369J7C1 | Calmodulin. | Alpha-actinin-like protein 1. | 0.752 |
CMD1_1 | arsB_0 | A0A369K1Y0 | A0A369JAA5 | Calmodulin. | Arsenite resistance protein ArsB. | 0.547 |
CMD1_1 | cdc4 | A0A369K1Y0 | A0A369K4J4 | Calmodulin. | Myosin regulatory light chain cdc4. | 0.920 |
ERB1 | IPI3 | A0A369JM51 | A0A369JQC4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pre-rRNA-processing protein IPI3. | 0.974 |
ERB1 | NOP7 | A0A369JM51 | A0A369K8U8 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
ERB1 | TEX10 | A0A369JM51 | A0A369KCC7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Testis-expressed sequence 10 protein. | 0.809 |
ERB1 | arsB_0 | A0A369JM51 | A0A369JAA5 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Arsenite resistance protein ArsB. | 0.534 |
ERB1 | gus1_1 | A0A369JM51 | A0A369JNX8 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Putative glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.600 |
IPI3 | ERB1 | A0A369JQC4 | A0A369JM51 | Pre-rRNA-processing protein IPI3. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.974 |
IPI3 | NOP7 | A0A369JQC4 | A0A369K8U8 | Pre-rRNA-processing protein IPI3. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.959 |
IPI3 | TEX10 | A0A369JQC4 | A0A369KCC7 | Pre-rRNA-processing protein IPI3. | Testis-expressed sequence 10 protein. | 0.996 |
IPI3 | arsB_0 | A0A369JQC4 | A0A369JAA5 | Pre-rRNA-processing protein IPI3. | Arsenite resistance protein ArsB. | 0.629 |
IPI3 | gus1_1 | A0A369JQC4 | A0A369JNX8 | Pre-rRNA-processing protein IPI3. | Putative glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.402 |
MYL9 | CMD1_0 | A0A369K4A7 | A0A369K6W1 | Myosin regulatory light polypeptide 9. | Calmodulin; Belongs to the calmodulin family. | 0.795 |
MYL9 | CMD1_1 | A0A369K4A7 | A0A369K1Y0 | Myosin regulatory light polypeptide 9. | Calmodulin. | 0.795 |
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