STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARIH2RBR-type E3 ubiquitin transferase. (819 aa)    
Predicted Functional Partners:
dbl4
RBR-type E3 ubiquitin transferase.
    
0.740
BIRC6
Baculoviral IAP repeat-containing protein 6.
    
 0.706
Hypma_016004
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.706
UBIQ
Ubiquitin.
    
 0.696
Hypma_010088
Uncharacterized protein.
    
  0.610
rrn7
RNA polymerase I-specific transcription initiation factor rrn7.
    
  0.610
Hypma_000125
Uncharacterized protein.
    
  0.610
ned-8
NEDD8.
    
  0.582
rhp23
UV excision repair protein rhp23.
    
 0.545
Hypma_013724
Uncharacterized protein.
    
  0.544
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.