STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_002582SEC7 domain-containing protein. (1389 aa)    
Predicted Functional Partners:
Hypma_011417
SEC7 domain-containing protein.
   
 
0.919
sec71
Protein transport protein sec71.
     
0.907
Hypma_002583
GATA-type domain-containing protein.
 
      0.842
ARF1
ADP-ribosylation factor 1.
    
 0.742
ARF3
ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.742
sec74
Arf guanine nucleotide exchange factor sec74.
     
0.732
ARF6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.698
Hypma_015357
Uncharacterized protein.
   
 
 0.639
ARF
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.618
SLC1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.512
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.