STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_000944F-box domain-containing protein. (460 aa)    
Predicted Functional Partners:
mad2l1-1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.859
Hypma_015749
Putative transcription initiation factor TFIID subunit.
   
 0.854
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.851
taf9
Transcription initiation factor TFIID subunit 9.
    
 0.851
taf2
Transcription initiation factor TFIID subunit 2.
   
 0.851
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.849
taf10
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.849
taf4
Transcription initiation factor TFIID subunit 4.
    
 0.848
CFT1
Protein CFT1; Belongs to the GST superfamily.
    
 0.845
TEX10
Testis-expressed sequence 10 protein.
   
 0.842
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.