STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (250 aa)    
Predicted Functional Partners:
nog1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.996
ALTA12
60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
  
 0.996
RL25
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
  
 0.996
rpl502
60S ribosomal protein L5-B.
  
 0.996
RPL26B
60S ribosomal protein L26-2.
  
 0.996
RPL31
60S ribosomal protein L31.
  
 0.995
RPL19B
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.995
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.995
RLA2
60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.995
Hypma_009025
60S ribosomal protein L30-1.
   
 0.995
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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