STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_012908GATA-type domain-containing protein. (505 aa)    
Predicted Functional Partners:
grx4
Monothiol glutaredoxin-4.
    
 
 0.766
tbp1
TATA-box-binding protein.
   
 0.748
Usp8
Ubiquitin carboxyl-terminal hydrolase 8; Belongs to the peptidase C19 family.
    
 0.741
NFYB1
Nuclear transcription factor Y subunit B-1.
    
 
 0.725
atf1
Transcription factor atf1.
    
 0.719
HTZ1
Histone H2A.Z; Belongs to the histone H2A family.
    
 0.705
gcn5
Histone acetyltransferase gcn5.
    
 0.702
NFYC2
Nuclear transcription factor Y subunit C-2.
    
 
 0.691
Hypma_009274
Uncharacterized protein.
    
 0.680
PRMT3
Protein arginine N-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.677
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.