STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pla1Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (611 aa)    
Predicted Functional Partners:
Hypma_010004
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.994
Hypma_016045
Pre-mRNA polyadenylation factor fip1.
   
 0.994
CFT1
Protein CFT1; Belongs to the GST superfamily.
    
 0.990
YTH1
mRNA 3'-end-processing protein YTH1.
    
 0.990
SYMPK
Symplekin.
    
 0.988
YSH1
Endoribonuclease YSH1.
   
 0.986
pfs2
Polyadenylation factor subunit 2.
   
 0.984
RNA14
mRNA 3'-end-processing protein RNA14.
    
 0.982
ipgm-1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.971
Hypma_014532
CSTF2_hinge domain-containing protein.
    
 0.970
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.