STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF1Protein YIP. (301 aa)    
Predicted Functional Partners:
Hypma_006654
Protein YIP.
   
 
 0.957
yipf5
Protein YIPF5.
   
 
 0.929
TVP23
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.895
hrf1
Protein transport protein yif1.
   
  
 0.498
Hypma_000632
Putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] subunit.
   
 
 0.444
tpsA_2
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1.
   
 
 0.444
tpsA_3
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A.
   
 
 0.444
tpsA_0
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A.
   
 
 0.444
tpsA_1
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A.
   
 
 0.444
TPS2_1
Trehalose-phosphatase.
   
 
 0.444
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.