Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCR1 | YHB1 | A0A369JYQ0 | A0A369JEY9 | Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Flavohemoprotein. | 0.566 |
Hypma_003454 | YHB1 | A0A369J3U9 | A0A369JEY9 | Uncharacterized protein. | Flavohemoprotein. | 0.709 |
Hypma_008315 | YHB1 | A0A369JVW9 | A0A369JEY9 | NACHT domain-containing protein. | Flavohemoprotein. | 0.709 |
Hypma_008318 | YHB1 | A0A369JRR7 | A0A369JEY9 | NACHT domain-containing protein. | Flavohemoprotein. | 0.709 |
Hypma_010898 | YHB1 | A0A369JKR9 | A0A369JEY9 | Uncharacterized protein. | Flavohemoprotein. | 0.709 |
Hypma_015739 | YHB1 | A0A369K4V4 | A0A369JEY9 | Uncharacterized protein. | Flavohemoprotein. | 0.709 |
NAR1_1 | OLE1_1 | A0A369KD47 | A0A369JRV9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.909 |
NAR1_1 | SCS7 | A0A369KD47 | A0A369K6N7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. | 0.876 |
NAR1_1 | YHB1 | A0A369KD47 | A0A369JEY9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Flavohemoprotein. | 0.746 |
NAR1_1 | cyb5r4 | A0A369KD47 | A0A369K0S9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family. | 0.962 |
OLE1_1 | NAR1_1 | A0A369JRV9 | A0A369KD47 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.909 |
OLE1_1 | SCS7 | A0A369JRV9 | A0A369K6N7 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. | 0.705 |
OLE1_1 | YHB1 | A0A369JRV9 | A0A369JEY9 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Flavohemoprotein. | 0.480 |
OLE1_1 | cyb5r4 | A0A369JRV9 | A0A369K0S9 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family. | 0.855 |
SCS7 | NAR1_1 | A0A369K6N7 | A0A369KD47 | Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.876 |
SCS7 | OLE1_1 | A0A369K6N7 | A0A369JRV9 | Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.705 |
SCS7 | YHB1 | A0A369K6N7 | A0A369JEY9 | Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. | Flavohemoprotein. | 0.493 |
SCS7 | cyb5r4 | A0A369K6N7 | A0A369K0S9 | Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. | Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family. | 0.793 |
YHB1 | HCR1 | A0A369JEY9 | A0A369JYQ0 | Flavohemoprotein. | Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.566 |
YHB1 | Hypma_003454 | A0A369JEY9 | A0A369J3U9 | Flavohemoprotein. | Uncharacterized protein. | 0.709 |
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