STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_001629Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
nuc-2
Ankyrin repeat protein nuc-2.
    
 0.685
ppe1
Serine/threonine-protein phosphatase.
    
  0.671
ekc1
Extragenic suppressor of kinetochore protein 1.
    
 0.641
ned-8
NEDD8.
    
  0.620
hus5_1
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.607
Hypma_002824
Uncharacterized protein.
    
  0.596
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.596
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
  0.593
Hypma_010088
Uncharacterized protein.
    
  0.575
rrn7
RNA polymerase I-specific transcription initiation factor rrn7.
    
  0.575
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.