STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_012318Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
Hypma_014850
Putative RNA-directed DNA polymerase from transposon X-element.
 
     0.740
UBIQ
Ubiquitin.
    
  0.697
nuc-2
Ankyrin repeat protein nuc-2.
    
 0.696
RPL21A
60S ribosomal protein L21-A.
   
   0.674
RPN11
26S proteasome non-ATPase regulatory subunit 14.
    
 0.663
ITSN2
Intersectin-2.
    
  0.653
crp-46
60S ribosomal protein L16.
   
   0.643
RpL8
60S ribosomal protein L8.
   
 
 0.632
tom40
Putative mitochondrial import receptor subunit tom40.
    
 0.621
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.612
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.