STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIGA6_6Gigasin-6. (604 aa)    
Predicted Functional Partners:
NAR1_1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.740
utp20
U3 small nucleolar RNA-associated protein 20.
   
  0.672
rps602
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.630
NEP1
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.629
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.629
utp11
Putative U3 small nucleolar RNA-associated protein 11.
    
  0.629
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.627
utp7
Putative U3 small nucleolar RNA-associated protein 7.
    
  0.620
UTP5
U3 small nucleolar RNA-associated protein 5.
    
 0.620
SPBC3B8.09
Uncharacterized protein C3B8.09.
    
  0.618
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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