STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rrnad1Protein RRNAD1. (445 aa)    
Predicted Functional Partners:
SEA4
SEH-associated protein 4.
    
 0.899
SPAC4F8.11
Putative WD repeat-containing protein C4F8.11.
    
 0.842
Hypma_004327
Putative RWD, RING finger and WD repeat-containing protein C11E3.05.
    
 0.831
SEC13
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
     
 0.710
IML1
Vacuolar membrane-associated protein IML1.
     
 0.592
NPR3
Nitrogen permease regulator 3.
     
 0.591
imp1
Mitochondrial inner membrane protease subunit 1.
   
 
 0.577
Hypma_011700
Nitrogen permease regulator 2.
     
 0.501
mip1
Target of rapamycin complex 1 subunit mip1.
     
 0.454
RRAGC
Ras-related GTP-binding protein C.
     
 0.443
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.