Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERCC1 | Hypma_000931 | A0A369JZV7 | A0A369JGW6 | DNA excision repair protein ERCC-1. | Uncharacterized protein. | 0.439 |
ERCC1 | aes1_3 | A0A369JZV7 | A0A369JM18 | DNA excision repair protein ERCC-1. | Acetylesterase. | 0.735 |
ERCC1 | rad16 | A0A369JZV7 | A0A369K0Q6 | DNA excision repair protein ERCC-1. | DNA repair protein rad16. | 0.996 |
ERCC1 | ssb2_0 | A0A369JZV7 | A0A369JHU9 | DNA excision repair protein ERCC-1. | Replication factor A protein 2. | 0.735 |
ERCC1 | ssb2_1 | A0A369JZV7 | A0A369JLK5 | DNA excision repair protein ERCC-1. | Replication factor A protein 2. | 0.816 |
HAT2 | Hypma_000931 | A0A369K8Y7 | A0A369JGW6 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.487 |
HAT2 | Hypma_012598 | A0A369K8Y7 | A0A369JKU9 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.710 |
HAT2 | Hypma_015946 | A0A369K8Y7 | A0A369KA08 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.670 |
HAT2 | niiA | A0A369K8Y7 | A0A369JMU4 | Histone acetyltransferase type B subunit 2. | Nitrite reductase [NAD(P)H]. | 0.670 |
Hypma_000931 | ERCC1 | A0A369JGW6 | A0A369JZV7 | Uncharacterized protein. | DNA excision repair protein ERCC-1. | 0.439 |
Hypma_000931 | HAT2 | A0A369JGW6 | A0A369K8Y7 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.487 |
Hypma_000931 | Hypma_012598 | A0A369JGW6 | A0A369JKU9 | Uncharacterized protein. | Uncharacterized protein. | 0.446 |
Hypma_000931 | Hypma_015946 | A0A369JGW6 | A0A369KA08 | Uncharacterized protein. | Uncharacterized protein. | 0.446 |
Hypma_000931 | RGR1 | A0A369JGW6 | A0A369JRG2 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.442 |
Hypma_000931 | aes1_3 | A0A369JGW6 | A0A369JM18 | Uncharacterized protein. | Acetylesterase. | 0.461 |
Hypma_000931 | niiA | A0A369JGW6 | A0A369JMU4 | Uncharacterized protein. | Nitrite reductase [NAD(P)H]. | 0.446 |
Hypma_000931 | rad16 | A0A369JGW6 | A0A369K0Q6 | Uncharacterized protein. | DNA repair protein rad16. | 0.467 |
Hypma_000931 | ssb2_0 | A0A369JGW6 | A0A369JHU9 | Uncharacterized protein. | Replication factor A protein 2. | 0.461 |
Hypma_000931 | ssb2_1 | A0A369JGW6 | A0A369JLK5 | Uncharacterized protein. | Replication factor A protein 2. | 0.461 |
Hypma_012598 | HAT2 | A0A369JKU9 | A0A369K8Y7 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.710 |
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