Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMO1 | NAR1_1 | A0A369JIB2 | A0A369KD47 | Nucleoporin AMO1. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.825 |
AMO1 | lcc1_1 | A0A369JIB2 | A0A369JH33 | Nucleoporin AMO1. | Laccase-1; Belongs to the multicopper oxidase family. | 0.591 |
FTR1 | lcc1_1 | A0A369KHU0 | A0A369JH33 | Plasma membrane iron permease. | Laccase-1; Belongs to the multicopper oxidase family. | 0.598 |
HMA5_1 | lcc1_1 | A0A369JG17 | A0A369JH33 | Putative copper-transporting ATPase HMA5. | Laccase-1; Belongs to the multicopper oxidase family. | 0.475 |
Hypma_002886 | lcc1_1 | A0A369J4P5 | A0A369JH33 | Beta-glucuronidase. | Laccase-1; Belongs to the multicopper oxidase family. | 0.515 |
Hypma_010015 | lcc1_1 | A0A369JUW8 | A0A369JH33 | Beta-glucuronidase. | Laccase-1; Belongs to the multicopper oxidase family. | 0.515 |
IREG2 | lcc1_1 | A0A369JPU6 | A0A369JH33 | Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. | Laccase-1; Belongs to the multicopper oxidase family. | 0.515 |
NAR1_1 | AMO1 | A0A369KD47 | A0A369JIB2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nucleoporin AMO1. | 0.825 |
NAR1_1 | lcc1_1 | A0A369KD47 | A0A369JH33 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Laccase-1; Belongs to the multicopper oxidase family. | 0.642 |
PCA1 | lcc1_1 | A0A369JD14 | A0A369JH33 | P-type cation-transporting ATPase. | Laccase-1; Belongs to the multicopper oxidase family. | 0.475 |
PEX10 | PEX12 | A0A369K6R5 | A0A369JIT1 | Peroxisome biogenesis factor 10. | Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. | 0.990 |
PEX10 | lcc1_1 | A0A369K6R5 | A0A369JH33 | Peroxisome biogenesis factor 10. | Laccase-1; Belongs to the multicopper oxidase family. | 0.478 |
PEX12 | PEX10 | A0A369JIT1 | A0A369K6R5 | Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. | Peroxisome biogenesis factor 10. | 0.990 |
PEX12 | lcc1_1 | A0A369JIT1 | A0A369JH33 | Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. | Laccase-1; Belongs to the multicopper oxidase family. | 0.478 |
lcc1_1 | AMO1 | A0A369JH33 | A0A369JIB2 | Laccase-1; Belongs to the multicopper oxidase family. | Nucleoporin AMO1. | 0.591 |
lcc1_1 | FTR1 | A0A369JH33 | A0A369KHU0 | Laccase-1; Belongs to the multicopper oxidase family. | Plasma membrane iron permease. | 0.598 |
lcc1_1 | HMA5_1 | A0A369JH33 | A0A369JG17 | Laccase-1; Belongs to the multicopper oxidase family. | Putative copper-transporting ATPase HMA5. | 0.475 |
lcc1_1 | Hypma_002886 | A0A369JH33 | A0A369J4P5 | Laccase-1; Belongs to the multicopper oxidase family. | Beta-glucuronidase. | 0.515 |
lcc1_1 | Hypma_010015 | A0A369JH33 | A0A369JUW8 | Laccase-1; Belongs to the multicopper oxidase family. | Beta-glucuronidase. | 0.515 |
lcc1_1 | IREG2 | A0A369JH33 | A0A369JPU6 | Laccase-1; Belongs to the multicopper oxidase family. | Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. | 0.515 |
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