STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_013081Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
rad16
DNA repair protein rad16.
    
 0.662
Hypma_012598
Uncharacterized protein.
   
 0.615
niiA
Nitrite reductase [NAD(P)H].
   
 0.615
Hypma_015946
Uncharacterized protein.
   
 0.615
mph1_1
ATP-dependent DNA helicase mph1.
    
 0.614
ERCC1
DNA excision repair protein ERCC-1.
    
 0.577
Hypma_009274
Uncharacterized protein.
    
 0.575
NPL4
Nuclear protein localization protein 4.
    
 0.564
NTF2
Nuclear transport factor 2.
    
 0.560
Hypma_011789
Uncharacterized protein.
    
  0.538
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.