STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IABFExtracellular exo-alpha-(1->5)-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. (326 aa)    
Predicted Functional Partners:
Hypma_004974
Uncharacterized protein; Belongs to the glycosyl hydrolase 43 family.
 
      0.868
atg22-1_1
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
 0.768
PDI
Protein disulfide-isomerase.
    
 0.768
Hypma_011724
Uncharacterized protein.
    
 0.625
png-1
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.571
Txndc5
Thioredoxin domain-containing protein 5.
    
 0.566
THIO
Thioredoxin; Belongs to the thioredoxin family.
    
 0.566
Hypma_000330
Thioredoxin domain-containing protein C13F5.05, mitochondrial.
    
 0.566
Hypma_010579
Thioredoxin Y, chloroplastic.
    
 0.566
plp1
Thioredoxin domain-containing protein plp1.
    
 0.566
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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