Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hypma_007977 | PAB1_0 | A0A369JY35 | A0A369JKM5 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.979 |
Hypma_007977 | RPS1 | A0A369JY35 | A0A369JKV9 | Uncharacterized protein. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.779 |
Hypma_007977 | Rps3 | A0A369JY35 | A0A369K4W2 | Uncharacterized protein. | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.759 |
Hypma_007977 | TIF1_1 | A0A369JY35 | A0A369JL95 | Uncharacterized protein. | ATP-dependent RNA helicase eIF4A. | 0.953 |
Hypma_007977 | TIF34 | A0A369JY35 | A0A369IYB3 | Uncharacterized protein. | Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.746 |
Hypma_007977 | cpc-2 | A0A369JY35 | A0A369JUZ7 | Uncharacterized protein. | Guanine nucleotide-binding protein subunit beta-like protein. | 0.679 |
Hypma_007977 | rps602 | A0A369JY35 | A0A369J8J9 | Uncharacterized protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.786 |
Hypma_007977 | sce3 | A0A369JY35 | A0A369K6V9 | Uncharacterized protein. | Putative RNA-binding protein sce3. | 0.921 |
Hypma_007977 | tif451 | A0A369JY35 | A0A369K9J9 | Uncharacterized protein. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.978 |
PAB1_0 | Hypma_007977 | A0A369JKM5 | A0A369JY35 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.979 |
PAB1_0 | RPS1 | A0A369JKM5 | A0A369JKV9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.853 |
PAB1_0 | Rps3 | A0A369JKM5 | A0A369K4W2 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.819 |
PAB1_0 | TIF1_1 | A0A369JKM5 | A0A369JL95 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | ATP-dependent RNA helicase eIF4A. | 0.955 |
PAB1_0 | TIF34 | A0A369JKM5 | A0A369IYB3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.636 |
PAB1_0 | cpc-2 | A0A369JKM5 | A0A369JUZ7 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Guanine nucleotide-binding protein subunit beta-like protein. | 0.585 |
PAB1_0 | rps602 | A0A369JKM5 | A0A369J8J9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.794 |
PAB1_0 | sce3 | A0A369JKM5 | A0A369K6V9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Putative RNA-binding protein sce3. | 0.883 |
PAB1_0 | tif451 | A0A369JKM5 | A0A369K9J9 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.979 |
PAB1_0 | tif471 | A0A369JKM5 | A0A369JXU0 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Eukaryotic translation initiation factor 4 gamma. | 0.982 |
RPS1 | Hypma_007977 | A0A369JKV9 | A0A369JY35 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | Uncharacterized protein. | 0.779 |
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