STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF12Transcription initiation factor TFIID subunit 12. (332 aa)    
Predicted Functional Partners:
taf6
Transcription initiation factor TFIID subunit 6.
   
 0.997
taf4
Transcription initiation factor TFIID subunit 4.
    
 0.997
taf7
Transcription initiation factor TFIID subunit 7.
    
 0.997
taf11
Transcription initiation factor TFIID subunit 11.
    
 0.997
taf2
Transcription initiation factor TFIID subunit 2.
    
 0.997
Hypma_015749
Putative transcription initiation factor TFIID subunit.
    
 0.997
Hypma_015003
PHD-type domain-containing protein.
    
 0.997
sgf29
SAGA-associated factor 29.
   
 0.996
sgf73
SAGA-associated factor 73.
   
 0.996
taf13
Transcription initiation factor TFIID subunit 13.
   
 0.996
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.