STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABB1CRas-related protein RABB1c. (217 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2.
    
 0.996
Hypma_010962
DH domain-containing protein.
    
 0.960
rga3
Putative Rho-type GTPase-activating protein 3.
    
 0.932
rga1
Rho-type GTPase-activating protein 1.
    
 0.854
Hypma_010353
Rho GDP-dissociation inhibitor.
   
 0.845
Gorasp2
Golgi reassembly-stacking protein 2.
   
 0.824
Hypma_007096
SH3 domain-containing protein.
    
 0.821
RABH1B
Ras-related protein RABH1b.
  
0.815
BET2
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.806
ypt-1
GTP-binding protein ypt1.
  
0.800
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.