STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcts1Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (184 aa)    
Predicted Functional Partners:
TMA22
Translation machinery-associated protein 22.
   
 
 0.980
SUI1A
Protein translation factor SUI1.
   
 
 0.947
Hypma_014822
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.907
rps802
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.806
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.799
Rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.798
Hypma_015542
40S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family.
   
   0.778
IMP3
U3 small nucleolar ribonucleoprotein IMP3.
   
 
 0.653
rps902
40S ribosomal protein S9-B; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.653
cpc-2
Guanine nucleotide-binding protein subunit beta-like protein.
   
   0.647
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.