STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cid14Poly(A) RNA polymerase cid14. (803 aa)    
Predicted Functional Partners:
Papd5
Non-canonical poly(A) RNA polymerase PAPD5.
  
  
 
0.928
rcd1
Cell differentiation protein rcd1.
    
   0.848
Hypma_008997
CID domain-containing protein.
    
 
 0.839
air1
Protein air1.
   
 
 0.766
mtr4_1
ATP-dependent RNA helicase mtr4.
   
 
 0.695
mtr4_0
ATP-dependent RNA helicase mtr4.
   
 
 0.695
Hypma_002572
Uncharacterized protein.
   
 
 0.628
GIS2
Zinc finger protein GIS2.
   
 
 0.628
Znfx1
NFX1-type zinc finger-containing protein 1.
    
 
 0.602
Hypma_010909
Uncharacterized protein.
    
 
 0.551
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.