STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc94Coiled-coil domain-containing protein 94. (293 aa)    
Predicted Functional Partners:
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.994
Cdc40
Pre-mRNA-processing factor 17.
    
 0.994
CWC25
Pre-mRNA-splicing factor CWC25.
   
 0.990
CEF1
Pre-mRNA-splicing factor CEF1.
    
 
 0.984
PRP46
Pre-mRNA-splicing factor PRP46.
    
 
 0.984
SYF1
Pre-mRNA-splicing factor SYF1.
    
 
 0.984
syf2
Pre-mRNA-splicing factor syf2.
    
 0.983
BUD31
Protein BUD31.
    
 
 0.983
CWC22
Pre-mRNA-splicing factor CWC22.
    
 0.983
CWC21
Pre-mRNA-splicing factor CWC21.
   
 0.978
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.