STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_010666APH domain-containing protein. (305 aa)    
Predicted Functional Partners:
RSM19
37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.915
rpsL
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.907
mrpl39
54S ribosomal protein L39, mitochondrial.
   
   0.904
rsm7
37S ribosomal protein S7, mitochondrial.
   
 
 0.903
mrps18
Putative 37S ribosomal protein S18, mitochondrial.
   
 
 0.900
rsm25
37S ribosomal protein S25, mitochondrial.
   
 
 0.900
Hypma_011581
Uncharacterized protein.
   
 
 0.899
mrp5
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.899
mrp4
37S ribosomal protein mrp4, mitochondrial; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.894
mrp20
54S ribosomal protein L23, mitochondrial.
   
 
 0.889
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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