STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_010843Uncharacterized protein. (1080 aa)    
Predicted Functional Partners:
Hypma_007510
Protein kinase domain-containing protein.
    
 0.651
Hypma_007668
Uncharacterized protein.
  
 
   0.465
EAF3
Chromatin modification-related protein EAF3.
    
  0.447
FRAS1
Extracellular matrix protein FRAS1.
   
 0.443
PC6
Proprotein convertase subtilisin/kexin type 5.
   
 0.443
RPN11
26S proteasome non-ATPase regulatory subunit 14.
    
  0.442
Hypma_015741
Uncharacterized protein.
   
  0.441
Hypma_008499
Uncharacterized protein.
  
     0.430
sfc4
Transcription factor tau subunit sfc4.
    
  0.427
sfc1
Transcription factor tau subunit sfc1.
    
  0.422
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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