STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asl1_4Alkali-sensitive linkage protein 1. (367 aa)    
Predicted Functional Partners:
mrpl16
54S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.595
Hypma_005722
Uncharacterized protein.
   
 0.595
MRP2
37S ribosomal protein MRP2, mitochondrial.
 
  
 
 0.586
celD
Endoglucanase.
   
  0.548
rpmJ
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.517
rsm23
37S ribosomal protein S23, mitochondrial.
    
   0.516
RSM27
Mitochondrial 37S ribosomal protein S27.
    
   0.516
mrpl17
54S ribosomal protein L17, mitochondrial.
    
   0.516
mrpl4
54S ribosomal protein L4, mitochondrial.
    
   0.516
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
    
   0.516
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (28%) [HD]