STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAC9.07cPutative GTP-binding protein C9.07c. (369 aa)    
Predicted Functional Partners:
TMA46
Translation machinery-associated protein 46.
   
 
 0.991
Hypma_011582
RWD domain-containing protein.
   
 
 0.950
Rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.913
RpL8
60S ribosomal protein L8.
   
 
 0.905
rpp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.905
RL25
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
   
   0.904
rps2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.882
Hypma_010052
Uncharacterized protein.
    
   0.882
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.882
DPB2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 
 0.882
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.