STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TY3B-I_1Transposon Ty3-I Gag-Pol polyprotein. (205 aa)    
Predicted Functional Partners:
pol_6
Retrovirus-related Pol polyprotein from transposon 17.6.
 
     0.582
Hypma_010546
RT_RNaseH domain-containing protein.
 
     0.567
ssb2_1
Replication factor A protein 2.
    
  0.549
HAT2
Histone acetyltransferase type B subunit 2.
    
 0.543
TY3B-I_2
Transposon Ty3-I Gag-Pol polyprotein.
 
     0.537
TY3B-G_1
Transposon Ty3-G Gag-Pol polyprotein.
 
     0.527
Tf2-11
Transposon Tf2-11 polyprotein.
 
     0.525
pol_2
Retrovirus-related Pol polyprotein from transposon gypsy.
 
     0.522
Hypma_000173
Reverse transcriptase domain-containing protein.
 
     0.520
Tf2-9_1
Transposon Tf2-9 polyprotein.
 
     0.518
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.