STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubx1UBX domain-containing protein 1. (387 aa)    
Predicted Functional Partners:
yjoB
Putative ATPase YjoB.
   
 0.987
Aspscr1
Tether containing UBX domain for GLUT4.
    
 0.983
ubxn1
UBX domain-containing protein 1.
   
 0.968
CDC48
Cell division cycle protein 48; Belongs to the AAA ATPase family.
   
 0.960
Plaa
Phospholipase A-2-activating protein.
    
 
 0.960
cdc48_0
Cell division cycle protein 48.
   
 0.960
cdc48_1
Cell division cycle protein 48.
   
 0.960
cdc-48.2
Transitional endoplasmic reticulum ATPase 2; Belongs to the AAA ATPase family.
   
 0.960
otu1
Putative ubiquitin thioesterase otu1.
   
 
 0.959
Hypma_011694
Ubiquitin fusion degradation protein 1.
   
 
 0.950
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.