STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPC25Putative kinetochore protein SPC25. (249 aa)    
Predicted Functional Partners:
NUF2
Putative kinetochore protein NUF2.
   
 0.996
NDC80
Putative kinetochore protein NDC80.
   
 0.995
mis13
Kinetochore protein mis13.
    
 0.961
spc24
Putative kinetochore protein spc24.
    
 
 0.937
mad2l1-1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 
 0.887
bub1
Checkpoint serine/threonine-protein kinase bub1.
   
 0.853
mad3
Mitotic spindle checkpoint component mad3.
   
 0.853
atf1
Transcription factor atf1.
    
 0.814
atg22-1_0
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
 0.814
ATG22
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
 0.814
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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