Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LIG | PCL2_1 | A0A369JFG3 | A0A369JSJ2 | DNA ligase. | PHO85 cyclin-2; Belongs to the cyclin family. | 0.594 |
LIG | adl1 | A0A369JFG3 | A0A369JWL3 | DNA ligase. | DNA ligase. | 0.678 |
LIG | cdc17 | A0A369JFG3 | A0A369K6W2 | DNA ligase. | DNA ligase. | 0.678 |
LIG | ku80 | A0A369JFG3 | A0A369KBB1 | DNA ligase. | ATP-dependent DNA helicase II subunit 2. | 0.918 |
LIG | mus-51 | A0A369JFG3 | A0A369K5E7 | DNA ligase. | ATP-dependent DNA helicase II subunit 1. | 0.916 |
LIG | rrp6 | A0A369JFG3 | A0A369J4H5 | DNA ligase. | Exosome complex exonuclease rrp6. | 0.762 |
LIG | tor2 | A0A369JFG3 | A0A369J175 | DNA ligase. | Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. | 0.762 |
LIG4 | PCL2_1 | A0A369JT52 | A0A369JSJ2 | DNA ligase. | PHO85 cyclin-2; Belongs to the cyclin family. | 0.691 |
LIG4 | adl1 | A0A369JT52 | A0A369JWL3 | DNA ligase. | DNA ligase. | 0.614 |
LIG4 | cdc17 | A0A369JT52 | A0A369K6W2 | DNA ligase. | DNA ligase. | 0.614 |
LIG4 | ku80 | A0A369JT52 | A0A369KBB1 | DNA ligase. | ATP-dependent DNA helicase II subunit 2. | 0.983 |
LIG4 | mus-51 | A0A369JT52 | A0A369K5E7 | DNA ligase. | ATP-dependent DNA helicase II subunit 1. | 0.986 |
LIG4 | rrp6 | A0A369JT52 | A0A369J4H5 | DNA ligase. | Exosome complex exonuclease rrp6. | 0.860 |
LIG4 | tor2 | A0A369JT52 | A0A369J175 | DNA ligase. | Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. | 0.860 |
PCL2_1 | LIG | A0A369JSJ2 | A0A369JFG3 | PHO85 cyclin-2; Belongs to the cyclin family. | DNA ligase. | 0.594 |
PCL2_1 | LIG4 | A0A369JSJ2 | A0A369JT52 | PHO85 cyclin-2; Belongs to the cyclin family. | DNA ligase. | 0.691 |
PCL2_1 | adl1 | A0A369JSJ2 | A0A369JWL3 | PHO85 cyclin-2; Belongs to the cyclin family. | DNA ligase. | 0.593 |
PCL2_1 | cdc17 | A0A369JSJ2 | A0A369K6W2 | PHO85 cyclin-2; Belongs to the cyclin family. | DNA ligase. | 0.593 |
PCL2_1 | ku80 | A0A369JSJ2 | A0A369KBB1 | PHO85 cyclin-2; Belongs to the cyclin family. | ATP-dependent DNA helicase II subunit 2. | 0.781 |
PCL2_1 | ligA | A0A369JSJ2 | A0A369JD65 | PHO85 cyclin-2; Belongs to the cyclin family. | DNA ligase. | 0.691 |
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