STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_007886PHD-type domain-containing protein. (654 aa)    
Predicted Functional Partners:
Rpd3
Histone deacetylase Rpd3.
    
 0.862
RPD3
Histone deacetylase RPD3.
    
 0.862
Hypma_000732
Uncharacterized protein.
    
 0.778
Tip60
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.778
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.778
ESA1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.778
ADO2
Adagio protein 2.
    
 0.763
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.750
SET2
Histone-lysine N-methyltransferase, H3 lysine-36 specific; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
 0.744
SET1
Histone-lysine N-methyltransferase, H3 lysine-4 specific.
    
 0.731
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.