STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC10BLeucine-rich repeat-containing protein 10B. (543 aa)    
Predicted Functional Partners:
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.965
not1
General negative regulator of transcription subunit 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.965
rcd1
Cell differentiation protein rcd1.
    
 0.964
not3
General negative regulator of transcription subunit 3.
    
 0.961
Hypma_011483
Putative general negative regulator of transcription C16C9.04c.
    
 0.960
Hypma_011993
DNA topoisomerase 2-associated protein pat1.
    
 
 0.875
not2
General negative regulator of transcription subunit 2.
    
 0.872
CUE1
Coupling of ubiquitin conjugation to ER degradation protein 1.
    
 0.872
dhh1
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
    
 0.857
Hypma_000574
Uncharacterized protein.
    
 0.808
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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