STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hsp90b1Endoplasmin. (828 aa)    
Predicted Functional Partners:
SGT1A
Protein SGT1 A.
    
 0.997
Hypma_011724
Uncharacterized protein.
  
 0.970
grp78
Glucose-regulated; Belongs to the heat shock protein 70 family.
   
 0.962
bipA
Glucose-regulated; Belongs to the heat shock protein 70 family.
   
 0.962
Hyou1
Hypoxia up-regulated protein 1.
   
 0.933
Hypma_016062
Uncharacterized protein.
   
 
 0.931
cdc37
Hsp90 co-chaperone Cdc37.
    
 0.930
PDI
Protein disulfide-isomerase.
   
 0.921
DNAJC3
DnaJ subfamily C member 3.
   
 0.921
CHORD
Cysteine and histidine-rich domain-containing protein.
   
 0.904
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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