STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_008131Uncharacterized protein. (892 aa)    
Predicted Functional Partners:
CWC24
Pre-mRNA-splicing factor CWC24.
   
 0.918
SLU7
Pre-mRNA-splicing factor SLU7.
   
 0.872
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.864
syf2
Pre-mRNA-splicing factor syf2.
    
 0.862
CWC22
Pre-mRNA-splicing factor CWC22.
   
 0.857
Ccdc94
Coiled-coil domain-containing protein 94.
    
 0.852
CWC25
Pre-mRNA-splicing factor CWC25.
    
 0.852
cdc28
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28.
   
 0.851
CYP1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.841
Ccdc12
Coiled-coil domain-containing protein 12.
    
  0.840
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.