STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znhit1Zinc finger HIT domain-containing protein 1. (175 aa)    
Predicted Functional Partners:
ARP6
Actin-like protein ARP6; Belongs to the actin family.
   
 
 0.977
SWR1
Helicase SWR1.
    
 
 0.975
RVB2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.961
YAF9
Protein AF-9.
   
 
 0.950
YL-1
Vacuolar protein sorting-associated protein 72.
    
 
 0.950
HTZ1
Histone H2A.Z; Belongs to the histone H2A family.
    
 
 0.949
ARP4
Actin-related protein 4; Belongs to the actin family.
    
 
 0.945
SWC4
SWR1-complex protein 4.
    
 
 0.942
RVB1_0
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.935
RVB1_1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.935
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.