STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad5DNA repair protein rad5. (1125 aa)    
Predicted Functional Partners:
rad18
Postreplication repair E3 ubiquitin-protein ligase rad18.
   
 0.832
pcn1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.819
ARP4
Actin-related protein 4; Belongs to the actin family.
   
 0.812
spm2
Ubiquitin-conjugating enzyme spm2.
    
 0.810
cdc10
Start control protein cdc10.
    
 0.807
arp5
Actin-like protein arp5; Belongs to the actin family.
    
 0.807
PHO85
Negative regulator of the PHO system.
    
 0.782
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.752
ies6
Chromatin-remodeling complex subunit ies6.
    
 0.752
Hypma_015347
Uncharacterized protein.
   
 0.745
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.