STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xlnA_3Endo-1,4-beta-xylanase A. (562 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2.
     
 0.747
sec9
Protein transport protein sec9.
   
 0.732
Hypma_011148
V-SNARE coiled-coil homology domain-containing protein.
    
 0.705
syb1
Synaptobrevin 1.
    
 0.705
psy1_0
Syntaxin-like protein psy1.
    
 0.691
psy1_1
Syntaxin-like protein psy1.
    
 0.691
Hypma_010962
DH domain-containing protein.
     
 0.678
sec1
Protein transport protein sec1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.644
Hypma_009184
ENTH domain-containing protein C19F8.03c.
    
 0.641
SPCC18.02
Putative MFS-type transporter C18.02.
     
 0.639
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.