STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnc_0Ribonuclease 3. (562 aa)    
Predicted Functional Partners:
MRPS9
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.699
RPL27
54S ribosomal protein L27, mitochondrial.
  
 
 0.697
rplQ
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.672
mrpl17
54S ribosomal protein L17, mitochondrial.
   
 
 0.670
mrpl32
Putative 54S ribosomal protein L32, mitochondrial.
  
   0.668
img1
54S ribosomal protein subunit img1, mitochondrial.
  
 
 0.667
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
   
 
 0.660
RPS16-1
30S ribosomal protein S16-1, chloroplastic.
  
 
 0.651
rsm23
37S ribosomal protein S23, mitochondrial.
   
 
 0.650
mrp20
54S ribosomal protein L23, mitochondrial.
   
   0.649
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.