STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xyd1D-xylose 1-dehydrogenase (NADP(+)). (366 aa)    
Predicted Functional Partners:
Hypma_003660
NAD-dependent protein deacetylase hst1.
    
  0.626
Hypma_006794
Uncharacterized protein.
  
 
 0.610
galK
Galactokinase.
  
 
 0.610
NMA2
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
     
 0.549
spe1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.548
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.530
krs1
Lysine--tRNA ligase.
  
    0.529
Hypma_013034
Putative aspartate-semialdehyde dehydrogenase.
   
 
  0.528
nuc-2
Ankyrin repeat protein nuc-2.
  
  0.523
miox
Inositol oxygenase.
   
 
 0.520
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.