STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDD1Protein NEDD1. (774 aa)    
Predicted Functional Partners:
TUB4_0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.888
TUB4_1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.888
TUBGCP5
Gamma-tubulin complex component 5.
    
 0.877
alp6
Spindle pole body component.
    
 0.861
Hypma_016097
Uncharacterized protein.
    
 0.861
tubgcp3
Spindle pole body component.
   
 0.780
alp4
Spindle pole body component.
   
 0.780
Hypma_000908
Serine/threonine-protein kinase PLK4.
    
 0.715
Nuak2
NUAK family SNF1-like kinase 2.
    
 0.715
CDC5
Serine/threonine-protein kinase.
    
 0.715
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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