Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Hypma_007542 | ITSN2 | A0A369JWX0 | A0A369JB64 | CoA_binding domain-containing protein. | Intersectin-2. | 0.664 |
| Hypma_007542 | SUS1 | A0A369JWX0 | A0A369JKL7 | CoA_binding domain-containing protein. | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | 0.623 |
| Hypma_007542 | TAF12 | A0A369JWX0 | A0A369JM72 | CoA_binding domain-containing protein. | Transcription initiation factor TFIID subunit 12. | 0.563 |
| Hypma_007542 | TRA1_1 | A0A369JWX0 | A0A369JQM7 | CoA_binding domain-containing protein. | Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. | 0.586 |
| Hypma_007542 | msp2_0 | A0A369JWX0 | A0A369JL11 | CoA_binding domain-containing protein. | Peroxidase 2. | 0.644 |
| Hypma_007542 | msp2_1 | A0A369JWX0 | A0A369JNT7 | CoA_binding domain-containing protein. | Peroxidase 2. | 0.644 |
| Hypma_007542 | ngg1 | A0A369JWX0 | A0A369JAP8 | CoA_binding domain-containing protein. | Chromatin-remodeling complexes subunit ngg1. | 0.577 |
| Hypma_007542 | sgf73 | A0A369JWX0 | A0A369JFD0 | CoA_binding domain-containing protein. | SAGA-associated factor 73. | 0.613 |
| Hypma_007542 | spt3 | A0A369JWX0 | A0A369JCW9 | CoA_binding domain-containing protein. | SAGA complex subunit spt3. | 0.645 |
| Hypma_007542 | taf10 | A0A369JWX0 | A0A369JK70 | CoA_binding domain-containing protein. | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | 0.557 |
| ITSN2 | Hypma_007542 | A0A369JB64 | A0A369JWX0 | Intersectin-2. | CoA_binding domain-containing protein. | 0.664 |
| SUS1 | Hypma_007542 | A0A369JKL7 | A0A369JWX0 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | CoA_binding domain-containing protein. | 0.623 |
| SUS1 | TAF12 | A0A369JKL7 | A0A369JM72 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | Transcription initiation factor TFIID subunit 12. | 0.987 |
| SUS1 | TRA1_1 | A0A369JKL7 | A0A369JQM7 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. | 0.981 |
| SUS1 | ngg1 | A0A369JKL7 | A0A369JAP8 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | Chromatin-remodeling complexes subunit ngg1. | 0.980 |
| SUS1 | sgf73 | A0A369JKL7 | A0A369JFD0 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | SAGA-associated factor 73. | 0.992 |
| SUS1 | spt3 | A0A369JKL7 | A0A369JCW9 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | SAGA complex subunit spt3. | 0.974 |
| SUS1 | taf10 | A0A369JKL7 | A0A369JK70 | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | 0.981 |
| TAF12 | Hypma_007542 | A0A369JM72 | A0A369JWX0 | Transcription initiation factor TFIID subunit 12. | CoA_binding domain-containing protein. | 0.563 |
| TAF12 | SUS1 | A0A369JM72 | A0A369JKL7 | Transcription initiation factor TFIID subunit 12. | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | 0.987 |
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